Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
9
histone modifications
8
eQTL
6
binding sites
5
gene expression
4
accessible chromatin
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
40
September, 2022
18
February, 2021
7
August, 2021
6
March, 2020
4
February, 2024
3
August, 2017
3
June, 2020
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2020
1
January, 2022
1
October, 2022
Available data
63
bed bed3+
12
bed bed9
10
tsv
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
90
Homo sapiens
Biosample type
56
tissue
primary cell
27
cell line
7
in vitro differentiated cells
Organ
418
brain
325
kidney
321
musculature of body
277
lung
266
intestine
229
limb
209
bodily fluid
208
heart
198
blood
193
embryo
168
connective tissue
168
large intestine
134
pancreas
108
stomach
106
extraembryonic component
105
epithelium
104
skin of body
90
liver
88
vasculature
83
adipose tissue
81
blood vessel
80
small intestine
78
uterus
68
prostate gland
67
bone element
63
placenta
62
adrenal gland
62
lymph node
61
ureter
55
eye
48
thymus
46
gonad
41
mammary gland
39
artery
39
spinal cord
35
esophagus
33
spleen
25
testis
24
lymphoid tissue
23
nerve
23
penis
21
ovary
20
thyroid gland
15
mouth
13
breast
13
pituitary gland
10
skeleton
10
tongue
10
urinary bladder
10
vagina
4
lymphatic vessel
4
nose
3
vein
Project
90
AMP
Genome assembly (visualization)
81
hg19
21
GRCh38
2
hg18
biosample_type!
primary cell
files.file_type!
bigWig
BIOSAMPLE
TYPE
90 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
eQTL
binding sites
gene expression
accessible chromatin
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
9
2
7
1
1
2
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
3
2
5
3
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
Download