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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
16
chromatin state
14
histone modifications
8
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
August, 2017
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
89
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
bigBed bed9
Organism
135
Homo sapiens
Biosample type
57
tissue
43
primary cell
28
cell line
7
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
132
AMP
3
ENCODE
Genome assembly (visualization)
111
hg19
44
GRCh38
2
hg18
files.file_type!
bigBed bed9
organ_slims!
blood vessel
BIOSAMPLE
TYPE
135 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
4
8
2
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
8
1
4
1
2
hepatic stellate cell
1
1
1
3
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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