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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
39
accessible chromatin
37
target gene predictions
31
chromatin state
28
gene expression
21
binding sites
20
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
88
September, 2022
62
February, 2021
29
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
6
November, 2021
4
March, 2023
4
May, 2020
3
January, 2020
3
May, 2021
3
May, 2022
2
August, 2017
2
February, 2020
2
January, 2021
2
October, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
171
bed bed3+
33
bigWig
32
tsv
28
bed bed9
3
csv
1
bam
1
bed bed9+
bigBed bed9
Organism
244
Homo sapiens
Biosample type
81
cell line
79
tissue
77
primary cell
7
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
236
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
208
hg19
83
GRCh38
2
hg18
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
244 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
tissue
liver
13
4
10
8
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 9 more…
primary cell
hepatocyte
1
8
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
3
1
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 6 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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