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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
11
histone modifications
6
binding sites
4
variant allelic effects
3
Fine-mapped variants
2
eQTL
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
85
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
126
Homo sapiens
Biosample type
52
tissue
40
primary cell
27
cell line
7
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
123
AMP
3
ENCODE
Genome assembly (visualization)
104
hg19
41
GRCh38
month_released!
August, 2021
organ_slims!
pituitary gland
vasculature
BIOSAMPLE
TYPE
126 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
differential activity
tissue
liver
13
10
1
4
9
2
1
1
1
1
right lobe of liver
2
1
1
1
3
1
primary cell
hepatocyte
1
3
13
8
1
1
1
2
hepatic stellate cell
1
1
1
3
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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