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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
219
gene expression
182
candidate regulatory elements
94
chromatin state
93
target gene predictions
74
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
12
eQTL
1
caQTL
Date released
271
September, 2022
214
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
407
bed bed3+
273
tsv
91
bed bed9
87
txt
59
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
795
Homo sapiens
Biosample type
368
primary cell
354
tissue
65
cell line
8
in vitro differentiated cells
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
647
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
505
hg19
162
GRCh38
2
hg18
month_released!
March, 2020
BIOSAMPLE
TYPE
795 results
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Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
hepatocyte
9
1
1
3
8
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 68 more…
tissue
kidney
7
29
16
14
10
1
2
1
1
liver
1
13
9
8
4
1
1
2
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 17 more…
cell line
HepG2
2
2
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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