Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
gene expression
13
binding sites
10
histone modifications
9
candidate regulatory elements
8
eQTL
7
target gene predictions
4
variant allelic effects
3
Fine-mapped variants
3
chromatin state
1
caQTL
1
differential activity
Date released
September, 2022
29
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
69
bed bed3+
24
tsv
23
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
106
Homo sapiens
Biosample type
53
primary cell
34
tissue
15
cell line
4
in vitro differentiated cells
Organ
760
epithelium
427
kidney
331
connective tissue
286
brain
187
vasculature
186
pancreas
171
musculature of body
147
heart
143
bodily fluid
140
blood vessel
138
blood
134
embryo
125
intestine
106
limb
106
liver
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
101
AMP
5
ENCODE
Genome assembly (visualization)
78
hg19
42
GRCh38
2
hg18
month_released!
March, 2023
September, 2022
BIOSAMPLE
TYPE
106 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
binding sites
histone modifications
candidate regulatory elements
eQTL
target gene predictions
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
differential activity
primary cell
hepatocyte
8
13
1
4
2
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
Liver fetal (hepatocyte)
1
tissue
liver
4
1
1
2
6
7
3
2
1
1
right lobe of liver
1
1
1
3
cell line
HepG2
2
3
1
1
2
1
HuH-7
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
Download