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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
24
gene expression
23
candidate regulatory elements
18
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
46
September, 2022
29
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
May, 2020
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
96
bed bed3+
28
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
150
Homo sapiens
Biosample type
59
primary cell
57
tissue
27
cell line
7
in vitro differentiated cells
Organ
900
epithelium
633
kidney
436
brain
434
connective tissue
364
musculature of body
307
lung
283
intestine
248
vasculature
240
heart
238
pancreas
231
limb
214
bodily fluid
208
embryo
203
blood
199
skin of body
190
blood vessel
169
large intestine
150
liver
143
extraembryonic component
117
stomach
107
eye
88
bone element
85
mammary gland
83
adipose tissue
83
small intestine
81
uterus
76
prostate gland
72
placenta
71
adrenal gland
68
artery
63
penis
61
lymph node
61
ureter
49
gonad
47
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
nerve
22
ovary
22
thyroid gland
21
lymphatic vessel
20
vein
19
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
145
AMP
5
ENCODE
Genome assembly (visualization)
119
hg19
60
GRCh38
2
hg18
month_released!
May, 2021
May, 2020
BIOSAMPLE
TYPE
150 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
8
13
1
2
1
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
pancreatic endothelial cell
1
3
tissue
liver
4
1
13
9
9
2
1
7
1
1
right lobe of liver
1
2
1
1
1
3
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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