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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
accessible chromatin
25
candidate regulatory elements
24
gene expression
24
target gene predictions
19
chromatin state
16
histone modifications
15
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
49
September, 2022
31
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
6
November, 2021
5
June, 2020
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
1
January, 2022
1
July, 2020
November, 2019
1
October, 2022
1
September, 2018
Available data
111
bed bed3+
28
tsv
24
bigWig
15
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
168
Homo sapiens
Biosample type
76
primary cell
57
tissue
28
cell line
7
in vitro differentiated cells
Organ
948
epithelium
652
kidney
465
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
160
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
136
hg19
61
GRCh38
2
hg18
month_released!
November, 2019
BIOSAMPLE
TYPE
168 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 5 more…
tissue
liver
3
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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