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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
accessible chromatin
21
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
September, 2018
Available data
97
bed bed3+
25
tsv
22
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
148
Homo sapiens
Biosample type
63
primary cell
57
tissue
28
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
408
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
148
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
86
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
143
AMP
5
ENCODE
Genome assembly (visualization)
119
hg19
58
GRCh38
2
hg18
month_released!
September, 2018
month_released!!
September, 2018
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
148 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
3
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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