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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
gene expression
18
accessible chromatin
10
histone modifications
9
candidate regulatory elements
8
eQTL
7
binding sites
7
target gene predictions
4
variant allelic effects
3
Fine-mapped variants
3
chromatin state
1
caQTL
1
differential activity
Date released
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
57
bed bed3+
20
tsv
17
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
90
Homo sapiens
Biosample type
37
primary cell
34
tissue
15
cell line
4
in vitro differentiated cells
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
233
pancreas
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
87
AMP
3
ENCODE
Genome assembly (visualization)
66
hg19
26
GRCh38
2
hg18
month_released!
September, 2022
organ_slims!
vasculature
BIOSAMPLE
TYPE
90 results
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Clear Filters
gene expression
accessible chromatin
histone modifications
candidate regulatory elements
eQTL
binding sites
target gene predictions
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
differential activity
primary cell
hepatocyte
13
8
4
1
2
2
hepatic stellate cell
1
3
1
1
Liver fetal (hepatocyte)
1
tissue
liver
1
4
2
6
7
1
3
2
1
1
right lobe of liver
1
1
1
3
cell line
HepG2
2
1
1
3
2
1
HuH-7
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
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