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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
18
accessible chromatin
18
target gene predictions
17
chromatin state
15
gene expression
14
histone modifications
8
eQTL
7
binding sites
4
variant allelic effects
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
86
bed bed3+
17
bigWig
17
tsv
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
126
Homo sapiens
Biosample type
53
tissue
39
primary cell
27
cell line
7
in vitro differentiated cells
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
123
AMP
3
ENCODE
Genome assembly (visualization)
106
hg19
41
GRCh38
2
hg18
organ_slims!
blood vessel
month_released!
March, 2020
BIOSAMPLE
TYPE
126 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
histone modifications
eQTL
binding sites
variant allelic effects
caQTL
differential activity
tissue
liver
13
4
8
9
1
2
7
1
1
1
right lobe of liver
2
1
1
1
1
primary cell
hepatocyte
1
8
3
1
9
4
1
2
hepatic stellate cell
1
3
1
1
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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