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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
36
candidate regulatory elements
26
target gene predictions
23
chromatin state
11
accessible chromatin
10
eQTL
10
histone modifications
8
binding sites
6
Fine-mapped variants
4
gene expression
1
caQTL
1
differential activity
1
variant allelic effects
Date released
64
September, 2022
29
February, 2021
9
March, 2020
7
August, 2021
6
June, 2020
3
August, 2017
3
February, 2020
3
January, 2020
3
May, 2021
2
January, 2022
2
May, 2022
2
October, 2022
1
February, 2024
1
May, 2020
1
November, 2019
1
September, 2018
Available data
94
bed bed3+
20
bed bed9
13
tsv
4
bigWig
1
bam
1
bigBed bed9
Organism
137
Homo sapiens
Biosample type
94
tissue
31
cell line
12
primary cell
Organ
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
137
AMP
ENCODE
Genome assembly (visualization)
127
hg19
38
GRCh38
2
hg18
organ_slims!
epithelium
award.project!
ENCODE
BIOSAMPLE
TYPE
137 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
binding sites
Fine-mapped variants
gene expression
caQTL
differential activity
variant allelic effects
tissue
liver
13
10
9
4
7
2
1
1
1
1
spinal cord
14
8
7
1
1
right lobe of liver
2
1
1
1
3
1
C1 segment of cervical spinal cord
1
3
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
spinal cord
1
2
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
1
1
2
1
1
1
astrocyte of the spinal cord
2
1
1
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