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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
148
candidate regulatory elements
91
target gene predictions
85
chromatin state
17
accessible chromatin
15
binding sites
14
histone modifications
9
eQTL
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
247
September, 2022
88
February, 2021
10
June, 2020
7
August, 2021
7
March, 2020
6
May, 2021
5
October, 2022
4
August, 2017
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2022
1
April, 2020
1
February, 2024
1
March, 2024
1
May, 2020
1
November, 2019
1
November, 2021
1
September, 2018
Available data
289
bed bed3+
81
bed bed9
9
tsv
6
bigWig
1
bam
1
bigBed bed9
Organism
389
Homo sapiens
Biosample type
239
tissue
124
cell line
26
primary cell
Organ
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
387
AMP
1
ENCODE
1
LungMap
Genome assembly (visualization)
379
hg19
96
GRCh38
2
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
389 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
4
1
2
7
1
1
1
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
+ See 1 more…
cell line
A549
21
19
18
1
2
1
HepG2
2
3
2
2
3
5
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 7 more…
primary cell
fibroblast of lung
6
4
4
2
hepatic stellate cell
1
1
1
3
1
1
1
endothelial cell of artery
1
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