Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
24
target gene predictions
chromatin state
12
accessible chromatin
10
histone modifications
9
eQTL
6
binding sites
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
36
September, 2022
24
February, 2021
7
August, 2021
7
March, 2020
5
June, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
81
bed bed3+
9
tsv
6
bigWig
Organism
99
Homo sapiens
Biosample type
65
tissue
24
cell line
10
primary cell
Organ
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
96
AMP
3
ENCODE
Genome assembly (visualization)
89
hg19
17
GRCh38
2
hg18
organ_slims!
epithelium
annotation_type!
chromatin state
BIOSAMPLE
TYPE
99 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
eQTL
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
liver
13
10
4
2
7
1
1
1
1
ovary
8
6
1
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
3
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
1
3
1
1
1
luteal cell
1
1
Download