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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
21
candidate regulatory elements
17
gene expression
17
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
95
bed bed3+
23
bigWig
22
tsv
13
bed bed9
1
bam
1
bigBed bed9
Organism
139
Homo sapiens
Biosample type
59
primary cell
53
tissue
27
cell line
in vitro differentiated cells
Organ
917
epithelium
648
kidney
424
brain
402
connective tissue
364
musculature of body
310
lung
287
intestine
265
pancreas
252
vasculature
239
heart
235
limb
218
bodily fluid
207
blood
195
skin of body
192
blood vessel
184
embryo
173
large intestine
141
extraembryonic component
139
liver
118
stomach
103
eye
89
bone element
84
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
ureter
lymph node
58
penis
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
1
pericardium
Project
134
AMP
5
ENCODE
Genome assembly (visualization)
114
hg19
56
GRCh38
2
hg18
organ_slims!
lymph node
month_released!
March, 2020
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
139 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
caQTL
primary cell
hepatocyte
8
1
9
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
8
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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