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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
accessible chromatin
67
gene expression
65
target gene predictions
47
candidate regulatory elements
34
chromatin state
34
differential activity
23
eQTL
20
histone modifications
15
variant allelic effects
12
binding sites
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
90
September, 2022
57
February, 2021
47
March, 2023
40
February, 2024
36
May, 2021
21
November, 2021
20
January, 2021
19
March, 2020
18
August, 2021
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
5
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
248
bed bed3+
96
tsv
74
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
413
Homo sapiens
Biosample type
172
tissue
169
primary cell
62
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
370
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
298
hg19
105
GRCh38
2
hg18
organ_slims!
lymph node
blood vessel
BIOSAMPLE
TYPE
413 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
liver
4
1
10
13
9
1
7
2
1
1
islet of Langerhans
6
11
1
3
13
1
1
2
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
primary cell
hepatocyte
8
13
3
1
1
4
2
1
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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