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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
14
histone modifications
binding sites
6
eQTL
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
46
September, 2022
17
February, 2021
10
February, 2024
8
August, 2021
6
March, 2020
5
June, 2020
5
November, 2021
3
August, 2017
3
May, 2021
2
January, 2020
2
May, 2020
2
May, 2022
1
February, 2020
1
November, 2019
1
September, 2018
Available data
88
bed bed3+
14
bed bed9
14
bigWig
4
tsv
1
bam
1
bigBed bed9
Organism
112
Homo sapiens
Biosample type
52
tissue
33
primary cell
23
cell line
4
in vitro differentiated cells
Organ
557
epithelium
407
brain
380
kidney
360
musculature of body
356
connective tissue
300
lung
277
intestine
235
limb
224
heart
192
embryo
183
vasculature
181
pancreas
181
skin of body
171
bodily fluid
164
large intestine
161
blood
143
blood vessel
142
extraembryonic component
116
stomach
112
liver
101
eye
83
small intestine
77
bone element
76
uterus
mammary gland
71
adrenal gland
69
placenta
68
prostate gland
67
adipose tissue
64
ureter
57
penis
54
artery
50
lymph node
48
thymus
42
gonad
40
esophagus
39
spinal cord
31
spleen
23
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
20
testis
18
skeleton
18
vein
17
mouth
14
bronchus
14
lymphatic vessel
11
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
4
nose
3
trachea
Project
107
AMP
5
ENCODE
Genome assembly (visualization)
112
hg19
54
GRCh38
1
hg18
organ_slims!
mammary gland
annotation_type!
binding sites
BIOSAMPLE
TYPE
112 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
4
13
10
9
2
5
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
8
1
3
1
4
2
hepatic stellate cell
3
1
1
1
1
endothelial cell of hepatic sinusoid
6
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
in vitro differentiated cells
hepatocyte
2
1
1
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