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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
accessible chromatin
25
candidate regulatory elements
23
target gene predictions
21
gene expression
18
chromatin state
15
binding sites
15
histone modifications
8
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
49
September, 2022
30
February, 2021
27
February, 2024
10
August, 2021
10
March, 2020
7
November, 2021
6
June, 2020
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
April, 2020
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
112
bed bed3+
25
bigWig
25
tsv
15
bed bed9
1
bam
1
bigBed bed9
Organism
165
Homo sapiens
Biosample type
79
primary cell
58
tissue
28
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
157
AMP
7
ENCODE
1
LungMap
Genome assembly (visualization)
136
hg19
63
GRCh38
2
hg18
organ_slims!
mammary gland
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
165 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
3
13
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
bronchial epithelial cell
1
4
2
2
2
1
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
+ See 3 more…
tissue
liver
4
13
10
1
9
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
See all biosamples
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