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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
15
accessible chromatin
14
histone modifications
11
gene expression
8
eQTL
7
binding sites
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
46
September, 2022
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
85
bed bed3+
14
bed bed9
11
tsv
9
bigWig
1
bam
1
bigBed bed9
Organism
123
Homo sapiens
Biosample type
57
tissue
34
primary cell
28
cell line
4
in vitro differentiated cells
Organ
835
epithelium
651
kidney
465
brain
435
connective tissue
360
musculature of body
310
lung
283
intestine
250
heart
245
vasculature
244
limb
205
pancreas
203
skin of body
190
bodily fluid
185
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
123
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
118
AMP
5
ENCODE
Genome assembly (visualization)
108
hg19
36
GRCh38
2
hg18
organ_slims!
ureter
month_released!
March, 2023
February, 2024
BIOSAMPLE
TYPE
123 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
10
9
4
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
1
3
4
8
1
1
hepatic stellate cell
1
1
1
3
1
1
1
endothelial cell of hepatic sinusoid
2
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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