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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
14
histone modifications
8
eQTL
6
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
October, 2022
1
September, 2018
Available data
88
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
135
Homo sapiens
Biosample type
58
tissue
43
primary cell
27
cell line
7
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
132
AMP
3
ENCODE
Genome assembly (visualization)
111
hg19
44
GRCh38
2
hg18
organ_slims!
ureter
blood vessel
month_released!
October, 2022
BIOSAMPLE
TYPE
135 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
4
9
2
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
8
1
4
1
2
hepatic stellate cell
1
1
1
3
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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