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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
39
accessible chromatin
37
target gene predictions
32
chromatin state
28
gene expression
21
binding sites
20
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
88
September, 2022
62
February, 2021
29
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
6
November, 2021
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
2
October, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
171
bed bed3+
33
bigWig
32
tsv
28
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
245
Homo sapiens
Biosample type
81
cell line
80
tissue
77
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
237
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
209
hg19
83
GRCh38
2
hg18
organ_slims!
ureter
BIOSAMPLE
TYPE
245 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
tissue
liver
13
4
10
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 9 more…
primary cell
hepatocyte
1
8
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
3
1
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 6 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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