Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
14
histone modifications
8
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
32
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
7
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
2
November, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
68
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
115
Homo sapiens
Biosample type
47
tissue
39
primary cell
23
cell line
6
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
113
AMP
2
ENCODE
Genome assembly (visualization)
91
hg19
43
GRCh38
2
hg18
organ_slims!
vasculature
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
115 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
1
4
9
2
7
1
1
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
1
13
8
1
4
1
2
hepatic stellate cell
1
1
3
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
Download