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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
98
candidate regulatory elements
59
binding sites
58
chromatin state
43
accessible chromatin
39
histone modifications
26
gene expression
11
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
163
September, 2022
114
February, 2021
58
February, 2024
20
October, 2022
18
June, 2020
15
November, 2021
13
August, 2021
11
March, 2020
9
May, 2021
5
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
348
bed bed3+
53
bed bed9
30
tsv
29
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
447
Homo sapiens
Biosample type
233
cell line
124
tissue
83
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
432
AMP
15
ENCODE
Genome assembly (visualization)
412
hg19
138
GRCh38
2
hg18
BIOSAMPLE
TYPE
447 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
2
5
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 30 more…
tissue
adrenal gland
17
28
14
1
1
1
liver
10
13
1
9
4
2
1
7
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
cerebrospinal fluid
1
+ See 1 more…
primary cell
hepatocyte
3
1
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
cortical cell of adrenal gland
2
3
1
peripheral blood mononuclear cell
4
1
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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