Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
60
candidate regulatory elements
48
target gene predictions
36
chromatin state
33
accessible chromatin
26
gene expression
15
histone modifications
13
binding sites
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
103
September, 2022
45
February, 2021
31
February, 2024
15
November, 2021
11
March, 2020
10
August, 2021
8
June, 2020
5
May, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
176
bed bed3+
33
bed bed9
30
tsv
29
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
253
Homo sapiens
Biosample type
138
tissue
74
primary cell
34
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
238
AMP
15
ENCODE
Genome assembly (visualization)
218
hg19
91
GRCh38
2
hg18
BIOSAMPLE
TYPE
253 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
adrenal gland
28
17
14
1
1
1
liver
13
10
9
4
1
2
1
7
1
1
Peyer's patch
7
3
3
1
right lobe of liver
2
1
1
1
1
3
germinal center
1
1
1
+ See 1 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
cortical cell of adrenal gland
2
3
1
pancreatic endothelial cell
1
3
+ See 4 more…
cell line
HepG2
2
3
2
2
5
3
GM18507
1
2
1
1
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download