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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
target gene predictions
74
candidate regulatory elements
58
binding sites
46
chromatin state
38
accessible chromatin
38
histone modifications
26
gene expression
11
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
127
September, 2022
100
February, 2021
57
February, 2024
20
October, 2022
18
June, 2020
12
August, 2021
11
March, 2020
8
May, 2021
7
November, 2021
5
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
299
bed bed3+
41
bed bed9
30
tsv
24
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
386
Homo sapiens
Biosample type
223
cell line
82
tissue
74
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
379
AMP
7
ENCODE
Genome assembly (visualization)
351
hg19
118
GRCh38
2
hg18
BIOSAMPLE
TYPE
386 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
2
5
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 27 more…
tissue
liver
10
13
1
9
4
2
1
7
1
1
ovary
6
8
4
1
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
whole blood
1
primary cell
hepatocyte
3
1
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
peripheral blood mononuclear cell
4
1
1
pancreatic endothelial cell
1
3
+ See 3 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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