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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
172
candidate regulatory elements
169
target gene predictions
124
accessible chromatin
104
chromatin state
89
binding sites
73
gene expression
63
histone modifications
32
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
277
September, 2022
216
February, 2021
75
February, 2024
56
November, 2021
37
June, 2020
32
October, 2022
24
May, 2021
23
August, 2021
19
March, 2020
17
September, 2023
12
August, 2017
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
8
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2019
Available data
653
bed bed3+
93
tsv
92
bed bed9
78
bigWig
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
877
Homo sapiens
Biosample type
348
primary cell
255
cell line
216
tissue
57
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
795
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
772
hg19
248
GRCh38
4
hg18
BIOSAMPLE
TYPE
877 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
1
3
8
1
1
13
4
2
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
3
2
2
endothelial cell of hepatic sinusoid
6
6
4
+ See 52 more…
cell line
K562
7
23
1
7
2
1
HepG2
2
3
2
2
3
5
GM12878
2
8
1
2
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
+ See 39 more…
tissue
placenta
26
15
1
14
1
2
1
liver
13
10
4
9
1
1
2
7
1
1
adipose tissue
7
8
2
6
1
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
+ See 11 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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