Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
target gene predictions
70
candidate regulatory elements
59
binding sites
44
chromatin state
39
histone modifications
32
accessible chromatin
25
gene expression
10
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
121
September, 2022
100
February, 2021
57
February, 2024
20
October, 2022
17
June, 2020
13
August, 2021
10
March, 2020
7
May, 2021
5
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
286
bed bed3+
39
bed bed9
29
tsv
19
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
369
Homo sapiens
Biosample type
233
cell line
67
primary cell
62
tissue
7
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
369
AMP
5
ENCODE
Genome assembly (visualization)
336
hg19
108
GRCh38
2
hg18
BIOSAMPLE
TYPE
369 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
5
2
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 30 more…
primary cell
hepatocyte
2
1
1
1
4
7
13
2
endothelial cell of hepatic sinusoid
6
4
4
hepatic stellate cell
1
1
1
1
2
1
1
peripheral blood mononuclear cell
4
1
1
pancreatic endothelial cell
1
3
+ See 2 more…
tissue
liver
10
13
1
9
2
4
1
7
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
cerebrospinal fluid
1
whole blood
1
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
Download