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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
target gene predictions
87
candidate regulatory elements
62
binding sites
52
chromatin state
41
accessible chromatin
40
histone modifications
27
gene expression
13
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
145
September, 2022
112
February, 2021
57
February, 2024
21
June, 2020
21
October, 2022
13
August, 2021
11
March, 2020
8
May, 2021
7
November, 2021
5
August, 2017
4
January, 2022
4
March, 2023
3
January, 2020
3
March, 2024
3
May, 2020
2
February, 2020
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
328
bed bed3+
47
bed bed9
31
tsv
24
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
424
Homo sapiens
Biosample type
240
cell line
101
tissue
76
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
417
AMP
7
ENCODE
Genome assembly (visualization)
386
hg19
126
GRCh38
2
hg18
BIOSAMPLE
TYPE
424 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
2
5
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 32 more…
tissue
liver
10
13
1
9
4
2
1
7
1
1
ovary
6
8
4
1
1
1
testis
3
7
1
3
1
1
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
+ See 2 more…
primary cell
hepatocyte
3
1
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
peripheral blood mononuclear cell
4
1
1
pancreatic endothelial cell
1
3
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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