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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
122
target gene predictions
80
chromatin state
65
binding sites
46
accessible chromatin
44
histone modifications
27
gene expression
12
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
219
September, 2022
146
February, 2021
60
February, 2024
24
June, 2020
21
October, 2022
13
August, 2021
12
May, 2021
11
March, 2020
11
November, 2021
8
August, 2017
4
March, 2023
3
January, 2020
3
January, 2022
3
March, 2024
3
May, 2020
2
February, 2020
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
428
bed bed3+
72
bed bed9
31
tsv
26
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
548
Homo sapiens
Biosample type
267
cell line
196
tissue
78
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
537
AMP
11
ENCODE
Genome assembly (visualization)
511
hg19
156
GRCh38
2
hg18
BIOSAMPLE
TYPE
548 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
cell line
K562
7
23
7
2
1
1
HepG2
2
3
2
3
2
5
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 38 more…
tissue
large intestine
27
14
13
1
1
liver
13
10
9
1
4
2
1
7
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 12 more…
primary cell
hepatocyte
1
3
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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