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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
26
accessible chromatin
25
candidate regulatory elements
24
gene expression
24
target gene predictions
16
histone modifications
15
binding sites
8
eQTL
4
chromatin state
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
34
September, 2022
31
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
6
November, 2021
5
June, 2020
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
112
bed bed3+
28
tsv
25
bigWig
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
154
Homo sapiens
Biosample type
73
primary cell
50
tissue
25
cell line
6
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
146
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
122
hg19
47
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
154 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
histone modifications
binding sites
eQTL
chromatin state
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 5 more…
tissue
liver
4
13
1
10
2
1
7
2
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
3
5
3
1
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
See all biosamples
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