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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
177
candidate regulatory elements
152
target gene predictions
114
chromatin state
86
histone modifications
78
accessible chromatin
74
binding sites
44
gene expression
39
Fine-mapped variants
39
eQTL
21
variant allelic effects
4
differential activity
1
caQTL
Date released
295
September, 2022
206
February, 2021
58
February, 2024
48
March, 2020
38
June, 2020
32
January, 2020
26
October, 2022
22
May, 2020
20
February, 2020
19
January, 2022
18
May, 2021
12
August, 2021
11
August, 2017
5
November, 2021
4
March, 2023
4
May, 2019
3
September, 2023
2
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
1
September, 2018
Available data
591
bed bed3+
103
bed bed9
96
tsv
44
bigWig
7
bigBed bed9
3
csv
1
bam
Organism
828
Homo sapiens
Biosample type
410
tissue
300
cell line
107
primary cell
11
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
824
AMP
5
ENCODE
Genome assembly (visualization)
753
hg19
263
GRCh38
2
hg18
BIOSAMPLE
TYPE
829 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
binding sites
gene expression
Fine-mapped variants
eQTL
variant allelic effects
differential activity
caQTL
tissue
brain
29
16
18
3
2
1
1
2
1
liver
13
10
9
2
4
1
1
7
1
1
caudate nucleus
5
3
4
1
2
1
3
2
1
substantia nigra
5
2
3
1
1
3
3
cerebellum
3
2
2
1
1
2
3
2
+ See 60 more…
cell line
K562
7
23
7
1
1
2
HepG2
2
3
2
5
2
3
GM12878
2
8
2
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
+ See 41 more…
primary cell
hepatocyte
1
3
1
4
8
1
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
1
3
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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