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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
95
target gene predictions
56
candidate regulatory elements
40
gene expression
35
accessible chromatin
33
chromatin state
23
eQTL
19
binding sites
17
histone modifications
9
Fine-mapped variants
7
variant allelic effects
6
differential activity
1
caQTL
Date released
88
September, 2022
82
February, 2024
62
February, 2021
18
March, 2020
16
August, 2021
9
June, 2020
9
May, 2021
7
February, 2020
7
January, 2020
7
November, 2021
6
January, 2022
6
May, 2020
5
August, 2017
4
March, 2023
3
March, 2024
3
September, 2018
2
May, 2022
2
October, 2022
1
January, 2018
1
July, 2020
1
November, 2019
1
November, 2022
Available data
235
bed bed3+
53
tsv
29
bigWig
28
bed bed9
3
csv
2
bigBed bed9
1
bam
Organism
341
Homo sapiens
Biosample type
168
tissue
96
cell line
69
primary cell
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
334
AMP
7
ENCODE
Genome assembly (visualization)
284
hg19
144
GRCh38
4
hg18
BIOSAMPLE
TYPE
341 results
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Clear Filters
target gene predictions
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
eQTL
binding sites
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
liver
10
13
1
4
9
7
1
2
1
1
adipose tissue
8
7
3
2
6
4
1
1
subcutaneous adipose tissue
2
5
2
1
6
3
1
1
omental fat pad
2
5
2
2
2
2
3
breast epithelium
3
5
1
2
+ See 12 more…
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
primary cell
hepatocyte
3
1
13
8
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
1
1
3
1
1
1
pancreatic endothelial cell
1
3
Ishikawa
1
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
white adipose cell
1
See all biosamples
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