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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
candidate regulatory elements
78
target gene predictions
70
accessible chromatin
64
chromatin state
63
gene expression
43
binding sites
37
histone modifications
25
eQTL
19
variant allelic effects
12
differential activity
9
Fine-mapped variants
3
caQTL
Date released
163
September, 2022
131
February, 2021
47
February, 2024
24
June, 2020
19
March, 2020
19
May, 2021
17
August, 2021
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
10
August, 2017
7
January, 2022
7
November, 2022
5
May, 2022
3
November, 2020
3
September, 2018
2
October, 2019
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
363
bed bed3+
75
tsv
54
bed bed9
37
bigWig
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
525
Homo sapiens
Biosample type
261
primary cell
149
tissue
57
cell line
57
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
525
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
439
hg19
125
GRCh38
4
hg18
BIOSAMPLE
TYPE
525 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
2
7
1
13
1
4
2
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
+ See 41 more…
tissue
liver
13
10
4
9
1
1
2
7
1
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 8 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
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