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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
153
target gene predictions
145
candidate regulatory elements
121
accessible chromatin
89
chromatin state
88
binding sites
73
gene expression
61
histone modifications
29
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
232
September, 2022
201
February, 2021
75
February, 2024
54
November, 2021
36
June, 2020
32
October, 2022
23
August, 2021
23
May, 2021
19
March, 2020
17
September, 2023
12
August, 2017
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2019
Available data
604
bed bed3+
91
tsv
77
bed bed9
76
bigWig
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
810
Homo sapiens
Biosample type
344
primary cell
252
cell line
156
tissue
57
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
732
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
708
hg19
230
GRCh38
4
hg18
BIOSAMPLE
TYPE
810 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
3
1
8
1
1
13
4
2
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
1
3
2
2
endothelial cell of hepatic sinusoid
6
6
4
+ See 49 more…
cell line
K562
23
7
1
7
2
1
HepG2
3
2
2
2
3
5
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
+ See 38 more…
tissue
liver
10
13
4
9
1
1
2
7
1
1
adipose tissue
8
7
2
6
1
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
right lobe of liver
1
2
1
1
1
3
+ See 10 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
1
2
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
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