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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
222
accessible chromatin
139
target gene predictions
120
candidate regulatory elements
93
differential activity
68
chromatin state
49
binding sites
42
variant allelic effects
38
histone modifications
11
eQTL
3
Fine-mapped variants
3
caQTL
Date released
191
September, 2022
130
February, 2021
128
November, 2021
62
September, 2023
61
February, 2024
29
June, 2020
29
March, 2023
20
January, 2021
19
May, 2021
18
August, 2021
16
May, 2020
15
January, 2020
15
November, 2022
12
February, 2023
8
March, 2020
7
April, 2020
7
October, 2022
6
August, 2017
5
October, 2019
4
May, 2022
2
February, 2020
2
November, 2019
1
January, 2022
1
September, 2018
Available data
613
bed bed3+
172
bigWig
95
tsv
62
bed bed9
14
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
788
Homo sapiens
Biosample type
592
primary cell
115
tissue
63
cell line
18
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
569
AMP
128
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
686
hg19
251
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
788 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
endothelial cell of umbilical vein
2
4
6
5
2
1
hepatocyte
8
3
1
1
1
2
4
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 129 more…
tissue
liver
4
10
13
1
9
1
2
7
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
right lobe of liver
1
2
1
1
3
+ See 15 more…
cell line
HepG2
2
3
2
2
3
5
EndoC_BH1
8
1
3
1
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
HuH-7.5
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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