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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
gene expression
207
accessible chromatin
132
target gene predictions
115
candidate regulatory elements
90
differential activity
63
chromatin state
40
variant allelic effects
36
binding sites
25
histone modifications
11
eQTL
3
Fine-mapped variants
3
caQTL
Date released
194
February, 2021
175
September, 2022
155
September, 2023
128
November, 2021
77
February, 2024
36
March, 2023
29
August, 2021
24
June, 2020
20
January, 2021
20
May, 2021
15
January, 2020
15
November, 2022
14
May, 2020
11
February, 2020
11
February, 2023
10
March, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
4
May, 2022
2
March, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
557
bed bed3+
323
tsv
178
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
973
Homo sapiens
Biosample type
828
primary cell
119
tissue
cell line
26
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
663
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
628
hg19
249
GRCh38
1
hg18
biosample_type!
cell line
BIOSAMPLE
TYPE
973 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 147 more…
tissue
liver
1
4
10
13
1
9
1
2
7
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
right lobe of liver
1
1
2
1
1
3
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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