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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
gene expression
200
accessible chromatin
125
target gene predictions
94
candidate regulatory elements
80
differential activity
54
chromatin state
38
variant allelic effects
33
binding sites
33
histone modifications
11
eQTL
3
Fine-mapped variants
3
caQTL
Date released
189
February, 2021
155
September, 2022
130
September, 2023
122
November, 2021
63
February, 2024
35
May, 2021
34
March, 2023
30
August, 2021
25
June, 2020
20
January, 2021
15
November, 2022
12
February, 2023
11
January, 2020
11
March, 2020
11
May, 2020
10
February, 2020
6
August, 2018
5
August, 2017
5
October, 2019
5
October, 2022
4
April, 2020
4
May, 2022
2
March, 2024
2
November, 2019
1
January, 2022
1
July, 2020
1
September, 2018
Available data
527
bed bed3+
299
tsv
163
bigWig
78
txt
49
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
xls
1
bigBed bed9
Organism
909
Homo sapiens
Biosample type
702
primary cell
119
tissue
64
cell line
24
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
631
AMP
130
KPMP
122
ENCODE
20
T1D
4
LungMap
2
community
Genome assembly (visualization)
588
hg19
222
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
909 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 126 more…
tissue
liver
1
4
10
13
1
9
1
2
7
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
right lobe of liver
1
1
2
1
1
3
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
HuH-7.5
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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