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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
target gene predictions
97
candidate regulatory elements
52
chromatin state
40
accessible chromatin
36
gene expression
26
binding sites
25
histone modifications
11
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
148
September, 2022
89
February, 2021
82
February, 2024
18
August, 2021
17
June, 2020
12
March, 2020
11
November, 2021
10
May, 2021
4
August, 2017
4
January, 2022
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
March, 2024
2
May, 2022
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
312
bed bed3+
48
bed bed9
40
tsv
27
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
416
Homo sapiens
Biosample type
155
cell line
128
tissue
95
primary cell
37
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
405
AMP
11
ENCODE
Genome assembly (visualization)
369
hg19
154
GRCh38
2
hg18
BIOSAMPLE
TYPE
416 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
H1-hESC
39
1
1
1
8
2
1
HepG2
3
2
2
2
3
5
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 18 more…
tissue
liver
10
13
9
4
1
1
2
7
1
1
chorionic villus
4
8
4
esophagus muscularis mucosa
2
5
2
1
1
esophagus squamous epithelium
2
6
2
1
trophoblast
3
4
2
1
1
+ See 9 more…
primary cell
hepatocyte
3
1
1
8
13
1
4
2
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
epithelial cell of esophagus
1
2
1
2
+ See 6 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
hepatocyte
1
2
1
+ See 5 more…
stem cell
H1-hESC
1
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