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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
accessible chromatin
66
candidate regulatory elements
46
target gene predictions
41
chromatin state
29
gene expression
27
binding sites
24
histone modifications
9
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
115
September, 2022
79
February, 2021
30
February, 2024
24
February, 2023
22
November, 2022
16
June, 2020
10
August, 2021
10
March, 2020
10
November, 2021
6
May, 2020
5
January, 2020
4
February, 2020
4
March, 2023
4
October, 2022
3
August, 2017
3
May, 2021
3
May, 2022
2
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
269
bed bed3+
69
bigWig
37
bed bed9
34
tsv
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
354
Homo sapiens
Biosample type
150
tissue
100
primary cell
91
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
342
AMP
10
ENCODE
2
T1D
Genome assembly (visualization)
316
hg19
99
GRCh38
2
hg18
BIOSAMPLE
TYPE
354 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
4
13
10
9
1
1
2
7
1
1
retina
23
6
3
3
1
1
1
1
1
pigmented layer of retina
20
eye
1
4
2
2
right lobe of liver
2
1
1
1
1
3
+ See 13 more…
primary cell
hepatocyte
8
1
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
retinal pigment epithelial cell
3
2
1
1
2
1
hepatic stellate cell
3
1
1
1
1
1
1
iris pigment epithelial cell
1
2
1
1
+ See 12 more…
cell line
HepG2
2
2
3
2
3
5
WERI-Rb-1
1
2
1
1
2
1
MG63
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
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