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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
43
candidate regulatory elements
29
accessible chromatin
29
target gene predictions
24
binding sites
24
chromatin state
23
gene expression
16
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
67
September, 2022
49
February, 2021
29
February, 2024
12
June, 2020
10
August, 2021
10
March, 2020
4
March, 2023
4
May, 2021
4
November, 2021
3
August, 2017
3
October, 2022
2
February, 2020
2
January, 2020
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
145
bed bed3+
27
tsv
21
bed bed9
21
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
205
Homo sapiens
Biosample type
88
cell line
58
tissue
52
primary cell
7
in vitro differentiated cells
Organ
934
epithelium
633
kidney
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
201
AMP
4
ENCODE
Genome assembly (visualization)
175
hg19
65
GRCh38
2
hg18
organ_slims!
connective tissue
month_released!
May, 2020
BIOSAMPLE
TYPE
205 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
gene expression
histone modifications
eQTL
differential activity
Fine-mapped variants
caQTL
variant allelic effects
cell line
HepG2
2
2
3
3
2
5
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
MM.1S
2
1
2
1
1
1
GM10248
2
1
1
1
1
+ See 13 more…
tissue
liver
13
4
10
1
9
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
8
3
1
1
13
4
1
endothelial cell of hepatic sinusoid
6
6
4
pancreatic endothelial cell
1
3
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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