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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
gene expression
190
candidate regulatory elements
103
target gene predictions
98
chromatin state
76
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
10
eQTL
3
Fine-mapped variants
1
caQTL
Date released
283
September, 2022
218
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
21
June, 2020
17
January, 2020
14
March, 2020
11
February, 2020
10
November, 2021
4
March, 2023
4
May, 2021
3
August, 2017
January, 2022
3
March, 2024
3
October, 2022
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
427
bed bed3+
280
tsv
95
bed bed9
87
txt
60
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
828
Homo sapiens
Biosample type
377
tissue
374
primary cell
69
cell line
8
in vitro differentiated cells
Organ
949
epithelium
651
kidney
454
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
678
AMP
140
KPMP
10
ENCODE
Genome assembly (visualization)
532
hg19
169
GRCh38
2
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
828 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
kidney
7
29
14
16
10
1
2
1
1
liver
1
13
10
9
4
1
1
2
6
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 18 more…
primary cell
hepatocyte
13
1
3
1
8
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 69 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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