Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
candidate regulatory elements
41
target gene predictions
30
accessible chromatin
14
histone modifications
13
binding sites
6
variant allelic effects
2
chromatin state
1
caQTL
Date released
66
September, 2022
44
February, 2021
16
February, 2024
7
June, 2020
7
November, 2021
5
January, 2020
5
May, 2020
4
August, 2021
4
March, 2020
4
May, 2021
2
August, 2017
2
May, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
169
bed bed3+
31
bed bed9
29
tsv
27
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
169
Homo sapiens
Biosample type
101
tissue
40
primary cell
25
cell line
3
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
162
AMP
7
ENCODE
Genome assembly (visualization)
168
hg19
37
GRCh38
1
hg18
BIOSAMPLE
TYPE
169 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
tissue
liver
13
10
4
2
1
1
1
renal pelvis
19
9
2
1
ovary
8
6
1
left renal pelvis
6
2
1
1
right renal pelvis
6
2
1
1
+ See 1 more…
primary cell
hepatocyte
1
3
8
4
1
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
1
1
3
1
luteal cell
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
5
3
1
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
See all biosamples
Download