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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
158
candidate regulatory elements
141
target gene predictions
131
accessible chromatin
106
chromatin state
91
gene expression
68
histone modifications
52
eQTL
44
Fine-mapped variants
37
differential activity
34
binding sites
32
variant allelic effects
2
sQTL
2
variant to gene
1
caQTL
Date released
270
September, 2022
167
February, 2021
57
March, 2020
55
February, 2024
51
March, 2023
47
May, 2021
36
January, 2020
30
June, 2020
28
May, 2020
23
January, 2022
23
November, 2021
22
February, 2020
20
January, 2021
18
August, 2021
12
August, 2017
7
August, 2018
7
October, 2022
6
October, 2019
4
May, 2019
4
November, 2019
3
September, 2023
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
September, 2018
Available data
569
bed bed3+
171
tsv
101
bigWig
93
bed bed9
14
bigBed narrowPeak
9
bigBed bed9
6
csv
4
bam
3
bed gappedPeak
3
xls
Organism
898
Homo sapiens
Biosample type
521
tissue
224
primary cell
139
cell line
14
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
854
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
733
hg19
273
GRCh38
2
hg18
BIOSAMPLE
TYPE
899 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
binding sites
variant allelic effects
sQTL
variant to gene
caQTL
tissue
brain
29
16
2
18
1
3
2
1
1
liver
13
10
4
9
1
2
7
1
1
1
islet of Langerhans
1
6
3
11
1
13
2
2
1
2
2
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
5
3
2
4
1
1
2
3
1
+ See 69 more…
primary cell
hepatocyte
1
3
8
1
13
4
1
2
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 26 more…
cell line
EndoC_BH1
1
8
8
3
1
HepG2
2
3
2
2
5
3
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 19 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
+ See 1 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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