Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
42
target gene predictions
27
accessible chromatin
27
chromatin state
25
gene expression
20
binding sites
20
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
76
September, 2022
55
February, 2021
29
February, 2024
14
May, 2021
10
August, 2021
10
March, 2020
8
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
October, 2022
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
166
bed bed3+
29
tsv
24
bed bed9
23
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
233
Homo sapiens
Biosample type
104
primary cell
63
tissue
53
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
228
AMP
5
ENCODE
Genome assembly (visualization)
199
hg19
71
GRCh38
2
hg18
BIOSAMPLE
TYPE
233 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
3
8
1
13
1
4
2
foreskin keratinocyte
11
4
4
endothelial cell of hepatic sinusoid
6
4
6
foreskin fibroblast
6
2
1
1
4
2
hepatic stellate cell
1
1
3
1
1
1
1
+ See 3 more…
tissue
liver
13
10
4
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
pituitary gland
1
1
skin of prepuce of penis
1
1
pituitary
1
cell line
HepG2
2
3
2
2
3
5
pituitary stalk
10
HuH-7
1
1
1
1
1
1
EH
2
1
1
EL
2
1
1
+ See 4 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
See all biosamples
Download