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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
68
candidate regulatory elements
45
target gene predictions
39
chromatin state
27
binding sites
26
gene expression
25
histone modifications
10
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
112
September, 2022
72
February, 2021
31
February, 2024
24
February, 2023
22
November, 2022
16
June, 2020
10
August, 2021
10
March, 2020
9
November, 2021
5
January, 2020
5
May, 2020
5
May, 2021
4
February, 2020
4
March, 2023
3
August, 2017
3
October, 2022
2
January, 2022
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
262
bed bed3+
59
bigWig
36
bed bed9
31
tsv
3
csv
1
bam
1
bigBed bed9
Organism
343
Homo sapiens
Biosample type
143
tissue
96
primary cell
91
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
334
AMP
9
ENCODE
Genome assembly (visualization)
307
hg19
90
GRCh38
2
hg18
BIOSAMPLE
TYPE
343 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
4
13
10
9
1
1
2
7
1
1
retina
23
6
3
3
1
1
1
1
1
pigmented layer of retina
20
prostate gland
1
4
2
2
2
2
1
eye
1
4
2
2
+ See 3 more…
primary cell
hepatocyte
8
1
3
1
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
retinal pigment epithelial cell
3
2
1
1
2
1
epithelial cell of prostate
4
3
2
hepatic stellate cell
3
1
1
1
1
1
1
+ See 8 more…
cell line
HepG2
2
2
3
2
3
5
22Rv1
4
2
2
1
1
WERI-Rb-1
1
2
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
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