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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
194
candidate regulatory elements
157
target gene predictions
107
chromatin state
65
binding sites
59
accessible chromatin
46
histone modifications
29
gene expression
14
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
297
September, 2022
177
February, 2021
63
February, 2024
28
June, 2020
24
November, 2021
21
October, 2022
14
May, 2021
13
March, 2020
12
August, 2021
9
August, 2017
5
January, 2022
5
March, 2024
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
2
November, 2019
1
July, 2020
1
September, 2018
Available data
536
bed bed3+
98
bed bed9
35
bigWig
33
tsv
3
csv
1
bam
1
bigBed bed9
Organism
686
Homo sapiens
Biosample type
327
tissue
257
cell line
95
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
662
AMP
24
ENCODE
Genome assembly (visualization)
645
hg19
198
GRCh38
2
hg18
BIOSAMPLE
TYPE
686 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
1
4
2
1
7
1
1
spleen
15
8
6
1
2
1
1
sigmoid colon
10
7
5
1
+ See 20 more…
cell line
K562
7
23
7
2
1
1
HepG2
2
3
2
3
2
5
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 35 more…
primary cell
hepatocyte
1
3
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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