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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
candidate regulatory elements
70
target gene predictions
56
chromatin state
39
accessible chromatin
26
gene expression
25
binding sites
20
histone modifications
9
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
157
September, 2022
83
February, 2021
32
February, 2024
20
November, 2021
12
June, 2020
11
March, 2020
10
August, 2021
7
May, 2021
5
August, 2017
4
March, 2023
4
October, 2022
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
267
bed bed3+
51
bed bed9
31
bigWig
30
tsv
3
csv
1
bam
1
bigBed bed9
Organism
362
Homo sapiens
Biosample type
168
tissue
120
primary cell
64
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
342
AMP
20
ENCODE
Genome assembly (visualization)
327
hg19
113
GRCh38
2
hg18
BIOSAMPLE
TYPE
362 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
stomach
40
21
19
3
1
1
1
liver
13
10
9
4
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
stomach smooth muscle
4
2
3
gastroesophageal sphincter
5
1
1
+ See 4 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
hepatic stellate cell
1
1
1
3
1
1
1
+ See 10 more…
cell line
MCF-7
9
6
5
1
3
2
HepG2
2
3
2
2
3
5
T47D
3
2
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
See all biosamples
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