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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
274
gene expression
269
candidate regulatory elements
179
target gene predictions
161
accessible chromatin
145
chromatin state
74
differential activity
50
binding sites
43
histone modifications
36
variant allelic effects
34
eQTL
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
400
September, 2022
323
February, 2021
157
September, 2023
59
November, 2021
49
February, 2024
48
August, 2021
40
June, 2020
31
May, 2020
26
January, 2020
22
March, 2020
20
February, 2020
20
May, 2021
15
October, 2022
11
March, 2023
10
August, 2017
9
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
March, 2024
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
1
November, 2019
Available data
749
bed bed3+
343
tsv
135
bed bed9
113
bigWig
93
txt
5
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
1279
Homo sapiens
Biosample type
648
primary cell
474
tissue
98
cell line
58
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1054
AMP
155
KPMP
59
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
910
hg19
291
GRCh38
4
hg18
BIOSAMPLE
TYPE
1279 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
13
1
3
8
1
1
4
2
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
pericyte cell
1
10
10
1
glomerular endothelial cell
14
2
1
2
1
1
+ See 116 more…
tissue
kidney
7
29
14
10
16
1
2
1
1
liver
1
13
10
4
9
1
1
2
7
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 30 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
+ See 22 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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