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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
271
gene expression
236
accessible chromatin
156
target gene predictions
144
candidate regulatory elements
98
differential activity
87
chromatin state
54
binding sites
53
variant allelic effects
41
histone modifications
17
eQTL
12
Fine-mapped variants
6
caQTL
Date released
238
February, 2021
230
September, 2022
165
September, 2023
128
November, 2021
80
February, 2024
38
March, 2023
38
May, 2021
31
August, 2021
31
June, 2020
27
January, 2020
26
May, 2020
23
March, 2020
20
January, 2021
16
February, 2023
15
February, 2020
15
November, 2022
9
October, 2022
7
April, 2020
7
October, 2019
6
August, 2017
6
August, 2018
5
November, 2019
4
January, 2022
4
May, 2022
3
March, 2024
1
July, 2020
1
May, 2019
1
September, 2018
Available data
690
bed bed3+
363
tsv
194
bigWig
81
bed bed9
80
txt
14
bigBed narrowPeak
9
bigBed bed9
6
csv
4
bam
3
bed gappedPeak
3
xls
Organism
1175
Homo sapiens
Biosample type
871
primary cell
203
tissue
75
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
853
AMP
165
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
792
hg19
309
GRCh38
2
hg18
BIOSAMPLE
TYPE
1175 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 157 more…
tissue
liver
1
4
10
13
1
9
1
2
7
1
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
2
3
ascending aorta
1
1
2
4
3
1
1
3
+ See 26 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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