Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
candidate regulatory elements
89
target gene predictions
81
chromatin state
18
accessible chromatin
16
binding sites
9
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
240
September, 2022
98
February, 2021
9
June, 2020
9
November, 2021
6
October, 2022
5
May, 2021
3
April, 2020
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
293
bed bed3+
80
bed bed9
9
bigWig
1
tsv
Organism
375
Homo sapiens
Biosample type
183
tissue
111
cell line
75
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
363
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
373
hg19
90
GRCh38
organ_slims!
esophagus
ureter
BIOSAMPLE
TYPE
375 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
skin of prepuce of penis
1
1
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
EH
2
1
1
+ See 7 more…
primary cell
foreskin keratinocyte
11
4
4
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
type II pneumocyte
2
4
1
foreskin melanocyte
4
1
1
+ See 4 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
See all biosamples
Download